Applying Conservation Genomic Techniques to Guide Management of the Reticulated Flatwoods Salamander (Ambystoma bishopi)

The Reticulated flatwoods salamander (Ambystoma bishopi) is a federally endangered amphibian endemic to the longleaf-pine ecosystem of the southeastern U.S. This study used analyses of single-nucleotide polymorphism (SNP) data, collected from 2,255 unique individuals across 5 breeding seasons, spread across the known extant range of A. bishopi, to characterize the genetic diversity and demographics of populations, genetic relationships among populations, and patterns and spatial extents of gene flow, and to evaluate potential effects of management on A. bishopi’s resiliency. Population structure was strongly hierarchical, with individual breeding ponds (n = 38) acting as semi-connected subpopulations within five regional metapopulations (Mayhaw in Georgia; Oglesby, Eastbay, Garcon, and Escribano in Florida). Likewise, gene flow among populations was scale-dependent: negligible genetic differentiation, indicative of high gene flow, was observed only between pairs of ponds separated by \u3c 0.5 km, whereas between 0.5 and 5 km I observed steep genetic isolation by distance, and beyond 5 km genetic differentiation was generally high and only weakly related to distance. Across several breeding seasons, the effective number of breeders (Nb) per pond per year averaged 26 individuals (range 4 to 104). Larger-area, slower-drying ponds located closer to other occupied ponds exhibited larger Nb and greater genetic diversity. Based on genetically-reconstructed pedigrees, the ongoing headstarting program at Escribano successfully captured 97.9% of the estimated total number of alleles, but only 63% of the total number families, in each cohort. Based on these results, I recommend the following: 1) Given its genetic distinctiveness, Georgia populations merit elevated priority for protection and restoration. 2) Resiliency and redundancy (a la the species’ recovery plan) should be assessed at the spatial grain of individual breeding ponds. 3) Attempts to restore habitat connectivity should consider dispersal over distances \u3e 500 m to be relatively unlikely. 4) Finally, to the extent that headstarted individuals are used to augment existing or introduce new populations, managers should consider the potential risks of founder effects, and reduce these risks by creating genetically and demographically diverse headstart samples, for example by maximizing the diversity of egg/larva collections over time and space within ponds

Butyrate Supplementation Exacerbates Myocardial and Immune Cell Mitochondrial Dysfunction in a Rat Model of Faecal Peritonitis

Mitochondrial dysfunction and immune cell dysfunction are commonplace in sepsis and are associated with increased mortality risk. The short chain fatty acid, butyrate, is known to have anti-inflammatory effects and promote mitochondrial biogenesis. We therefore explored the immunometabolic effects of butyrate in an animal model of sepsis. Isolated healthy human volunteer peripheral mononuclear cells were stimulated with LPS in the presence of absence of butyrate, and released cytokines measured. Male Wistar rats housed in metabolic cages received either intravenous butyrate infusion or placebo commencing 6 h following faecal peritonitis induction. At 24 h, splenocytes were isolated for high-resolution respirometry, and measurement of mitochondrial membrane potential (MMP), reactive oxygen species (mtROS), and intracellular cytokines (TNF alpha, IL-10) using flow cytometry. Isolated splenocytes from septic and septic butyrate treated rats were stimulated with LPS for 18 h and the effects of butyrate on cytokine release assessed. Ex vivo, butyrate (1.8 mM) reduced LPS-induced TNF alpha (p = 0.019) and IL-10 (p = 0.001) release by human PBMCs. In septic animals butyrate infusion reduced the respiratory exchange ratio (p < 0.001), consistent with increased fat metabolism. This was associated with a reduction in cardiac output (p = 0.001), and increased lactate (p = 0.031) compared to placebo-treated septic animals (p < 0.05). Butyrate treatment was associated with a reduction in splenocyte basal respiration (p = 0.077), proton leak (p = 0.022), and non-mitochondrial respiration (p = 0.055), and an increase in MMP (p = 0.007) and mtROS (p = 0.027) compared to untreated septic animals. Splenocyte intracellular cytokines were unaffected by butyrate, although LPS-induced IL-10 release was impaired (p = 0.039). In summary, butyrate supplementation exacerbates myocardial and immune cell mitochondrial dysfunction in a rat model of faecal peritonitis

Systemic risk and food security. Emerging trends and future avenues for research

The unanticipated international food price spike of 2008 has raised concerns about global food security. Might food systems lastingly fail to supply, trade, and distribute food? Might widespread unsustainable agricultural practices irreversibly alter ecosystems? Or might large scale food shortages trigger political unrest? To answer these questions, we reflect upon the concept of systemic risk and conduct a review of the literature on systemic risks and food security. First, we present the concept of systemic risk and current trends in systemic risk research. We then analyze contributions on systemic risk and food security. We first show that the literature has so far focused on a) agricultural production and correlated yield-losses, and on ways of pooling risk at regional or global-level, and b) the role of international trade in increasing or decreasing systemic risk. We then identify avenues for further research, highlighting the impact of intensive farming on ecosystems. Finally, we discuss the concept of systemic risk: we show that scholars need to be careful when assuming that there exists just one global food system; we show that systemic risk can be understood in various ways, beyond the domino effect paradigm. © 202